C--C-AAGTGCTAGA-TCG-TT-TCTT--CCTCTACTA-AATATGCGACGCCAG
C--T-GCGGATAC-A-TAA-CT-CGTGG-CCGTGCCGA-AAATCCT-TTATGAG
CA-TGAGATTGACTATTACCCT-TAGAG-CTAGGACAA-TGAAAAC-ATGTTAA
CACTCTAGTCCACAAACGACCTATGGAAACTATGATTAGCAGATGTGAGGCTGA
T--T-AAACCAGATA-CGA-AA-TGCA--CC-CGAGCG-TGTCTCC-TGGCACA
T--T-A-GCGCTCTG-CAA-AG-TGAT--CC-TGGAC--CGCTTCC-TGAGAGG
T--C-T-ATCCGCAA-GAT-AT-TACT--CCACAAGAC-TGCCTAT-CCATAGT
TC-T-ACGTAAGTTA-CTC-GC-AAGGG-TTGTATCTA-ATGCTTT-TGAGACA

Alignment cost:    4307
Elapsed time =  24.054 [sec.]