Publications by Mikkel H. Schierup

2009

  • Schierup MH, Mailund T, Li H, Wang J, Tjonneland A, Vogel U, Bolund L, Nexo BA: Haplotype frequencies in a sub-region of chromosome 19q13.3, related to risk and prognosis of cancer, differ dramatically between ethnic groups. BMC medical genetics 2009, 10:20.
  • Preker P, Nielsen J, Schierup MH, Jensen TH: RNA polymerase plays both sides: vivid and bidirectional transcription around and upstream of active promoters. Cell cycle (Georgetown, Tex 2009, 8(8):1106-1107.
  • Guo YL, Bechsgaard JS, Slotte T, Neuffer B, Lascoux M, Weigel D, Schierup MH: Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck. Proceedings of the National Academy of Sciences of the United States of America 2009, 106(13):5246-5251.
  • Emily M, Mailund T, Hein J, Schauser L, Schierup MH: Using biological networks to search for interacting loci in genome-wide association studies. Eur J Hum Genet 2009.
  • Dutheil JY, Ganapathy G, Hobolth A, Mailund T, Uyenoyama MK, Schierup MH: Ancestral Population Genomics: The Coalescent Hidden Markov Model Approach. Genetics 2009.
  • Boggs NA, Dwyer KG, Shah P, McCulloch AA, Bechsgaard J, Schierup MH, Nasrallah ME, Nasrallah JB: Expression of Distinct Self-Incompatibility Specificities in Arabidopsis thaliana. Genetics 2009, 182(4):1313-1321.

2008

  • Besenbacher S, Mailund T, Schierup MH. Local Phylogeny Mapping of Quantitative Traits: Higher Accuracy and Better Ranking Than Single Marker Association in Genomewide Scans..Genetics. 2008 Dec 8. [Epub ahead of print]
  • Preker P, Nielsen J, Kammler S, Lykke-Andersen S, Christensen MS, Mapendano CK, Schierup MH, Jensen TH. RNA exosome depletion reveals transcription upstream of active human promoters. Science. 2008 Dec 19;322(5909):1851-4. Epub 2008 Dec 4.
  • Schierup MH, Bechsgaard JS, Christiansen FB. Selection at Work in Self-Incompatible Arabidopsis Lyrata II. Spatial Distribution of S-Haplotypes in Iceland. Genetics. 2008 Sep 9. [Epub ahead of print]
  • Castric V, Bechsgaard J, Schierup MH, Vekemans X. Repeated adaptive introgression at a gene under multiallelic balancing selection. PLoS Genet. 2008 Aug 29;4(8):e1000168.
  • Schierup MH, Vekemans X.Genomic consequences of selection on self-incompatibility genes.
    Curr Opin Plant Biol. 2008 Apr;11(2):116-22. Epub 2008 Mar 7. Review.
  • Ehlers BK, Schierup MH. When gametophytic self-incompatibility meets gynodioecy.
    Genet Res. 2008 Feb;90(1):27-35.

2007

  • Hobolth, A, Christensen, OF, Mailund, T & Schierup, MH 2007, Genomic relationships and speciation times of human, chimpanzee and gorilla inferred from a coalescent hidden Markov model, PLoS Genetics, vol. 3, nr. 2.
  • Leppela, J, Bechsgaard, JS, Schierup, MH & Savolainen, O 2007, Transmission ratio distortion in Arabidopsis lyrata: effects of population divergence and the S-locus., Heredity, vol. 100, nr. 1, s. 71-8.
  • Fredsted, T., Schierup, M.H., Groenevald, L.F., Kappeler, P.M. 2007, Genetic structure, lack of sex-biased dispersal and behavioral flexibility in the pair-living fat-tailed dwarf lemur, Cheirogaleus medius, Behavioral Ecology and Sociobiology, [pdf]
  • Jørgensen, F.G., Schierup, M.H., Clark, A.G. 2007, Heterogeneity in Regional GC Content and Differential Usage of Codons and Amino Acids in GC-Poor and GC-Rich Regions of the Genome of Apis mellifera, Molecular Biology and Evolution, vol. 24 nr. 2, s. 611-619. [pdf]

2006

  • Schierup, M.H. 2006, Consanguinity, inbreeding, and genetic drift in Italy by LL Cavalli-Sforza, A Moroni and G Zei, Heredity, vol. 96, s. 336-336. [pdf]
  • Hobolth, A., Christensen, O.F., Mailund, T., Schierup, M.H. 2006, "Genomic Relationships and Speciation Times of Human, Chimpanzee, and Gorilla Inferred from a Coalescent Hidden Markov Model", PLoS Genetics, vol. 3 nr. 2, [pdf]
  • Mailund, T. Schierup, M. H., Pedersen, C. N. S., Mechlenborg P. J. M., Madsen J. N. and Schauser, L.. CoaSim: A flexible environment for simulating genetic data under coalescent models, BMC Bioinformatics, 6, 252 [pdf]
  • Poulsen, N., Nielsen,EE, Schierup, MH, Loeschcke, V and Grønkjær, P. 2006. Long-term stability and effective population size in North Sea and Baltic Sea cod (Gadus morhua)., Molecular Ecology, 15: 321-331 [pdf]
  • Mailund, T., Besenbacher, S., Schierup, M.H. 2006, "Whole genome association mapping by incompatibilities and local perfect phylogenies", BMC Bioinformatics, vol. 7 nr. 454, [pdf]
  • Thomas Bataillon, Thomas Mailund, Steinunn Thorlacius, Eirikur Steingrimsson, Thorunn Rafnar, Magnus M Halldorsson, Violeta Calian, Mikkel H Schierup. 2006. The effective size of the Icelandic population and the prospects for LD mapping: inference from unphased microsatellite markers. European Journal of Human Genetics, May 31 [pdf]
  • Jesper S. Bechsgaard, Vincent Castric, Deborah Charlesworth, Xavier Vekemans, and Mikkel H. Schierup 2006.The transition to self-compatibility in Arabidopsis thaliana and evolution within S-haplotypes over 10 million years, Molecular Biology and Evolution, Jun 16 [pdf]
  • Mailund, T., Schierup, M.H., Pedersen, C.N.S., Madsen, J.N., Hein, J., Schauser, L. 2006, "GeneRecon—A coalescent based tool for fine-scale association mapping", Bioinformatics, vol. 22 nr. 18, s. 2317–2318. [pdf]
  • Schierup, M. H., J. S. Bechsgaard, L. H. Nielsen and F. B. Christiansen (2006). Selection at work in self-incompatible arabidopsis lyrata: mating patterns in a natural population. Genetics. vol. 172, s. 477-484 [pdf]

2005 and before

  • Hein, J., M. H. Schierup and C. Wiuf (2005).Gene Genealogies, Variation and Evolution: A primer in coalescent theory.Oxford University Press.1-300.
  • Rafnar, T., S. Thorlacius, E. Steingrimsson, M. H. Schierup, J. N. Madsen, V. Calian, B. J. Eldon, T. Jonsson, J. Hein and S. S. Thorgeirsson (2004). The icelandic cancer project--a population-wide approach to studying cancer.Nature reviews cancer, 4 (6): 488-492.[pdf]
  • Bechsgaard, J., T. Bataillon and M. H. Schierup (2004). Uneven segregation of sporophytic self-incompatibility alleles in arabidopsis lyrata. Journal of evolutionary biology, online. [pdf]
  • Charlesworth, D., B. K. Mable, M. H. Schierup, C. Bartolom?usson and P. Awadalla (2003). Diversity and selection linkage at of genes in the self-incompatibility gene family in arabidopsis lyrata. Genetics, 164: 1519-1535. [pdf]
  • Charlesworth, D., C. Bartolom?M. H. Schierup and B. K. Mable (2003). Haplotype structure of the stigmatic self-incompatibility gene in natural populations of arabidopsis lyrata. Molecular biology and evolution, 20 (9): 1741-1753. [pdf]
  • Eskildsen, S., J. Justesen, M. H. Schierup and R. Hartmann (2003). Characterization of the 2-5 oligoadenylate synthetase ubiquitin-like family. Nucleic acids res, 31: 3166-3173. [pdf]
  • Mable, B., M. H. Schierup and D. Charlesworth (2003). Estimating the number, frequency, and dominance of s-alleles in a natural population of c (brassicaceae) with sporophytic control of self-incompatibility. Heredity., 90: 422-431. [pdf]
  • Richman, A. D., L. G. Herrera, D. Nash and M. H. Schierup (2003). The relative roles of mutation vs. recombination in generating allelic polymorphism at an mhc class ii locus in peromyscus maniculatus. Genetical research, 82: 89-99. [pdf]
  • S?d, I. Z., T. Boesen, T. Mygind, R. Melkova, S. Birkelund, G. Christiansen and M. H. Schierup (2002). Recombination in mycoplasma hominis. Infection, genetics and evolution, 1 (1): 277-285.
  • Schierup, M. H. and J. Hein (2000). Recombination and the molecular clock. Molecular biology and evolution, 17 (10): 1578-1579. [pdf]
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